SuccessConsole Output

<===[JENKINS REMOTING CAPACITY]===>channel started
log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f /media/ephemeral0/workspace/phyloutils/pom.xml -U -e clean source:jar package jar:test-jar
[INFO] Error stacktraces are turned on.
[INFO] Scanning for projects...
Projects to build: [MavenProject: edu.berkeley.compbio:phyloutils:0.93-SNAPSHOT @ /media/ephemeral0/workspace/phyloutils/pom.xml]
Downloading: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml
Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/maven-metadata.xml
Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml
Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-metadata.xml
Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml (11 KB at 15.7 KB/sec)
Downloaded: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml (21 KB at 20.7 KB/sec)
Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-metadata.xml (11 KB at 3.0 KB/sec)
Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/maven-metadata.xml (21 KB at 5.8 KB/sec)
Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml
Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml
Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml (632 B at 34.3 KB/sec)
Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml (632 B at 3.0 KB/sec)
projectStarted edu.berkeley.compbio:phyloutils:0.93-SNAPSHOT
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building phyloutils 0.93-SNAPSHOT
[INFO] ------------------------------------------------------------------------
mojoStarted org.apache.maven.plugins:maven-clean-plugin:2.4.1(default-clean)
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ phyloutils ---
[INFO] Deleting /media/ephemeral0/workspace/phyloutils/target
mojoSucceeded org.apache.maven.plugins:maven-clean-plugin:2.4.1(default-clean)
mojoStarted org.codehaus.mojo:cobertura-maven-plugin:2.5.1(clean)
[INFO] 
[INFO] --- cobertura-maven-plugin:2.5.1:clean (clean) @ phyloutils ---
mojoSucceeded org.codehaus.mojo:cobertura-maven-plugin:2.5.1(clean)
Jul 08, 2012 12:55:03 AM hudson.maven.ExecutedMojo <init>
WARNING: Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo
mojoStarted org.apache.maven.plugins:maven-source-plugin:2.1.2(default-cli)
[INFO] 
[INFO] --- maven-source-plugin:2.1.2:jar (default-cli) @ phyloutils ---
[INFO] Building jar: /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT-sources.jar
mojoSucceeded org.apache.maven.plugins:maven-source-plugin:2.1.2(default-cli)
mojoStarted org.apache.maven.plugins:maven-resources-plugin:2.5(default-resources)
[INFO] 
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ phyloutils ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 7 resources
mojoSucceeded org.apache.maven.plugins:maven-resources-plugin:2.5(default-resources)
mojoStarted org.apache.maven.plugins:maven-compiler-plugin:2.4(default-compile)
[INFO] 
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ phyloutils ---
[INFO] Compiling 35 source files to /media/ephemeral0/workspace/phyloutils/target/classes
[WARNING] /media/ephemeral0/workspace/phyloutils/src/main/java/edu/berkeley/compbio/phyloutils/NewickWithSynonymsAndRanksTaxonomyService.java:[11,45] NotImplementedException is internal proprietary API and may be removed in a future release
[WARNING] /media/ephemeral0/workspace/phyloutils/src/main/java/edu/berkeley/compbio/phyloutils/NewickWithSynonymsAndRanksTaxonomyService.java:[277,12] NotImplementedException is internal proprietary API and may be removed in a future release
mojoSucceeded org.apache.maven.plugins:maven-compiler-plugin:2.4(default-compile)
mojoStarted org.apache.maven.plugins:maven-resources-plugin:2.5(default-testResources)[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 4 resources

[INFO] 
[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ phyloutils ---
mojoSucceeded org.apache.maven.plugins:maven-resources-plugin:2.5(default-testResources)
[INFO] Compiling 4 source files to /media/ephemeral0/workspace/phyloutils/target/test-classes
mojoStarted org.apache.maven.plugins:maven-compiler-plugin:2.4(default-testCompile)
[INFO] 
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ phyloutils ---
mojoSucceeded org.apache.maven.plugins:maven-compiler-plugin:2.4(default-testCompile)
mojoStarted org.apache.maven.plugins:maven-surefire-plugin:2.12(default-test)
[INFO] 
[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ phyloutils ---
[INFO] Surefire report directory: /media/ephemeral0/workspace/phyloutils/target/surefire-reports

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running TestSuite
2012-07-08 00:55:40,130 [main] INFO  edu.berkeley.compbio.phyloutils.NewickStringTaxonomyService - Cache key: itol090314_name.tree, false
2012-07-08 00:55:40,307 [main] INFO  com.davidsoergel.dsutils.CacheManager - Loading cache: /tmp/edu.berkeley.compbio.phyloutils.CiccarelliTaxonomyService/itol090314_name.tree, false.basePhylogeny
2012-07-08 00:55:41,110 [main] INFO  edu.berkeley.compbio.phyloutils.NewickStringTaxonomyService - Loaded caches for itol090314_name.tree, false
BasicRootedPhylogeny{root}
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.248 sec

Results :

Tests run: 6, Failures: 0, Errors: 0, Skipped: 0

mojoSucceeded org.apache.maven.plugins:maven-surefire-plugin:2.12(default-test)
[JENKINS] Recording test results
mojoStarted org.apache.maven.plugins:maven-jar-plugin:2.4(default-jar)
[INFO] 
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ phyloutils ---
[INFO] Building jar: /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT.jar
mojoSucceeded org.apache.maven.plugins:maven-jar-plugin:2.4(default-jar)
mojoStarted org.apache.maven.plugins:maven-jar-plugin:2.4(default)
[INFO] Building jar: /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT-tests.jar
[INFO] 
[INFO] --- maven-jar-plugin:2.4:test-jar (default) @ phyloutils ---
mojoSucceeded org.apache.maven.plugins:maven-jar-plugin:2.4(default)
mojoStarted org.apache.maven.plugins:maven-jar-plugin:2.4(default)
[INFO] 
[INFO] --- maven-jar-plugin:2.4:jar (default) @ phyloutils ---
mojoSucceeded org.apache.maven.plugins:maven-jar-plugin:2.4(default)
mojoStarted org.apache.maven.plugins:maven-jar-plugin:2.4(default-cli)
[INFO] [WARNING] Artifact edu.berkeley.compbio:phyloutils:test-jar:tests:0.93-SNAPSHOT already attached to project, ignoring duplicate

[INFO] --- maven-jar-plugin:2.4:test-jar (default-cli) @ phyloutils ---
mojoSucceeded org.apache.maven.plugins:maven-jar-plugin:2.4(default-cli)
projectSucceeded edu.berkeley.compbio:phyloutils:0.93-SNAPSHOT
sessionEnded
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 1:33.178s
[INFO] Finished at: Sun Jul 08 00:56:00 UTC 2012
[INFO] Final Memory: 20M/48M
[INFO] ------------------------------------------------------------------------
Projects to build: [MavenProject: edu.berkeley.compbio:phyloutils:0.93-SNAPSHOT @ /media/ephemeral0/workspace/phyloutils/pom.xml]
[JENKINS] Archiving /media/ephemeral0/workspace/phyloutils/pom.xml to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/phyloutils/modules/edu.berkeley.compbio$phyloutils/builds/2012-07-07_20-54-07/archive/edu.berkeley.compbio/phyloutils/0.93-SNAPSHOT/phyloutils-0.93-SNAPSHOT.pom
[JENKINS] Archiving /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT.jar to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/phyloutils/modules/edu.berkeley.compbio$phyloutils/builds/2012-07-07_20-54-07/archive/edu.berkeley.compbio/phyloutils/0.93-SNAPSHOT/phyloutils-0.93-SNAPSHOT.jar
[JENKINS] Archiving /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT-sources.jar to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/phyloutils/modules/edu.berkeley.compbio$phyloutils/builds/2012-07-07_20-54-07/archive/edu.berkeley.compbio/phyloutils/0.93-SNAPSHOT/phyloutils-0.93-SNAPSHOT-sources.jar
[JENKINS] Archiving /media/ephemeral0/workspace/phyloutils/target/phyloutils-0.93-SNAPSHOT-tests.jar to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/phyloutils/modules/edu.berkeley.compbio$phyloutils/builds/2012-07-07_20-54-07/archive/edu.berkeley.compbio/phyloutils/0.93-SNAPSHOT/phyloutils-0.93-SNAPSHOT-tests.jar
Waiting for Jenkins to finish collecting data