Started by upstream project "conja" build number 15 originally caused by: Started by GitHub push by davidsoergel Building in workspace /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace > git rev-parse --is-inside-work-tree Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/davidsoergel/jlibsvm.git Fetching upstream changes from https://github.com/davidsoergel/jlibsvm.git > git --version > git fetch --tags --progress https://github.com/davidsoergel/jlibsvm.git +refs/heads/*:refs/remotes/origin/* > git rev-parse origin/master^{commit} Checking out Revision 840bc582330697f955444b9d3d9058e3b02a3a19 (origin/master) > git config core.sparsecheckout > git checkout -f 840bc582330697f955444b9d3d9058e3b02a3a19 > git rev-list 840bc582330697f955444b9d3d9058e3b02a3a19 Parsing POMs [workspace] $ /usr/share/apache-tomcat-7.0.22/.jenkins/tools/hudson.model.JDK/Java_6u34/bin/java -Xmx1024M -XX:MaxPermSize=256M -cp /usr/share/apache-tomcat-7.0.22/.jenkins/plugins/maven-plugin/WEB-INF/lib/maven31-agent-1.5.jar:/usr/share/apache-tomcat-7.0.22/.jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/boot/plexus-classworlds-2.5.1.jar:/usr/share/apache-tomcat-7.0.22/.jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/conf/logging jenkins.maven3.agent.Maven31Main /usr/share/apache-tomcat-7.0.22/.jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1 /usr/share/apache-tomcat-7.0.22/webapps/jenkins/WEB-INF/lib/remoting-2.43.jar /usr/share/apache-tomcat-7.0.22/.jenkins/plugins/maven-plugin/WEB-INF/lib/maven31-interceptor-1.5.jar /usr/share/apache-tomcat-7.0.22/.jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.5.jar 40403 <===[JENKINS REMOTING CAPACITY]===>channel started Executing Maven: -B -f /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/pom.xml -U -e clean source:jar package jar:test-jar javadoc:jar [INFO] Error stacktraces are turned on. [WARNING] [WARNING] Some problems were encountered while building the effective settings [WARNING] Unrecognised tag: 'scmVersionType' (position: START_TAG seen ...</username>\n <scmVersionType>... @22:21) @ /usr/share/apache-tomcat-7.0.22/.m2/settings.xml, line 22, column 21 [WARNING] [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for edu.berkeley.compbio:jlibsvm:jar:0.92-SNAPSHOT [WARNING] 'build.plugins.plugin.version' for org.codehaus.mojo:build-helper-maven-plugin is missing. @ line 148, column 12 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] Downloading: http://repo.maven.apache.org/maven2/org/codehaus/mojo/build-helper-maven-plugin/maven-metadata.xml [INFO] Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/build-helper-maven-plugin/maven-metadata.xml [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/codehaus/mojo/build-helper-maven-plugin/maven-metadata.xml (604 B at 1.0 KB/sec) [INFO] Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/build-helper-maven-plugin/maven-metadata.xml (604 B at 0.9 KB/sec) [INFO] Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-metadata.xml [INFO] Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml [INFO] Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/maven-metadata.xml [INFO] Downloading: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml (13 KB at 130.3 KB/sec) [INFO] Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/codehaus/mojo/maven-metadata.xml (20 KB at 119.6 KB/sec) [INFO] Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-metadata.xml (13 KB at 69.5 KB/sec) [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml (20 KB at 144.6 KB/sec) [INFO] Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml [INFO] Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml [INFO] Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml (717 B at 3.8 KB/sec) [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-source-plugin/maven-metadata.xml (717 B at 3.6 KB/sec) [INFO] Downloading: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml [INFO] Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml [INFO] Downloaded: http://dev.davidsoergel.com/nexus/content/groups/public/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml (782 B at 11.2 KB/sec) [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-javadoc-plugin/maven-metadata.xml (782 B at 6.0 KB/sec) [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building jlibsvm 0.92-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ jlibsvm --- [INFO] Deleting /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target [INFO] [INFO] --- cobertura-maven-plugin:2.5.1:clean (clean) @ jlibsvm --- [INFO] [INFO] >>> maven-source-plugin:2.3:jar (default-cli) @ jlibsvm >>> [WARNING] Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo [INFO] [INFO] <<< maven-source-plugin:2.3:jar (default-cli) @ jlibsvm <<< [INFO] [INFO] --- maven-source-plugin:2.3:jar (default-cli) @ jlibsvm --- [INFO] Building jar: /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-sources.jar [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ jlibsvm --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ jlibsvm --- [INFO] Compiling 88 source files to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/classes [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/SolutionModel.java:[5,45] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/multi/MultiClassModel.java:[18,45] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/legacyexec/svm_train.java:[38,45] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/SolutionModel.java:[141,12] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/SolutionModel.java:[146,12] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/multi/MultiClassModel.java:[635,18] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/legacyexec/svm_train.java:[556,13] sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ jlibsvm --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 10 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ jlibsvm --- [INFO] Compiling 1 source file to /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/test-classes [INFO] [INFO] --- maven-surefire-plugin:2.12:test (default-test) @ jlibsvm --- [INFO] Surefire report directory: /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/surefire-reports ------------------------------------------------------- T E S T S ------------------------------------------------------- Running TestSuite Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.469 sec [JENKINS] Recording test results Results : Tests run: 1, Failures: 0, Errors: 0, Skipped: 0 log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ jlibsvm --- [INFO] Building jar: /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT.jar [INFO] [INFO] --- maven-jar-plugin:2.4:test-jar (default) @ jlibsvm --- [INFO] Building jar: /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-tests.jar [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default) @ jlibsvm --- [INFO] [INFO] --- maven-assembly-plugin:2.2-beta-5:single (package) @ jlibsvm --- [INFO] Reading assembly descriptor: src/main/assembly/assembly.xml [INFO] Building tar : /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-distribution.tar.gz [INFO] [INFO] --- build-helper-maven-plugin:1.9:attach-artifact (attach-artifacts) @ jlibsvm --- [INFO] [INFO] --- maven-jar-plugin:2.4:test-jar (default-cli) @ jlibsvm --- [INFO] [INFO] --- maven-javadoc-plugin:2.9.1:jar (default-cli) @ jlibsvm --- [INFO] Loading source files for package edu.berkeley.compbio.jlibsvm... Loading source files for package edu.berkeley.compbio.jlibsvm.oneclass... Loading source files for package edu.berkeley.compbio.jlibsvm.regression... Loading source files for package edu.berkeley.compbio.jlibsvm.multi... Loading source files for package edu.berkeley.compbio.jlibsvm.util... Loading source files for package edu.berkeley.compbio.jlibsvm.legacyexec... Loading source files for package edu.berkeley.compbio.jlibsvm.binary... Loading source files for package edu.berkeley.compbio.jlibsvm.kernel... Loading source files for package edu.berkeley.compbio.jlibsvm.qmatrix... Loading source files for package edu.berkeley.compbio.jlibsvm.labelinverter... Loading source files for package edu.berkeley.compbio.jlibsvm.scaler... Constructing Javadoc information... Standard Doclet version 1.6.0_34 Building tree for all the packages and classes... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//AbstractSvmProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ContinuousModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//DiscreteModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ExplicitSvmProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ExplicitSvmProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameter.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameter.Builder.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameterGrid.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameterGrid.Builder.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameterPoint.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//ImmutableSvmParameterPoint.Builder.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//LabelParser.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//MutableSvmProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SigmoidProbabilityModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SolutionModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SolutionVector.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SolutionVector.Status.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//Solver.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//Solver_NU.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//Solver.SolutionVectorPair.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SVM.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SvmContext.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SvmException.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm//SvmProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//MutableOneClassProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//OneClassModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//OneClassProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//OneClassProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//OneClassSolver.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/oneclass//OneClassSVC.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//EpsilonSVR.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//MutableRegressionProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//Nu_SVR.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionCrossValidationResults.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionSolver.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionSolverNu.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/regression//RegressionSVM.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//BatchClusterLabelInverter.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassificationSVM.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassificationSVMAdapter.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassModel.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassModel.AllVsAllMode.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassModel.OneVsAllMode.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassProblem.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MultiClassProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//MutableMultiClassProblemImpl.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//SvmMultiClassCrossValidationResults.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/multi//VotingResult.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/util//ArrayParsers.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/util//MathSupport.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/util//SparseVector.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/util//SubtractionMap.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/legacyexec//svm_predict.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/legacyexec//svm_scale.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/legacyexec//svm_toy.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/legacyexec//svm_train.html... Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/edu/berkeley/compbio/jlibsvm/binary//AlphaModel.html... 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Generating /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/apidocs/stylesheet.css... 11 warnings [WARNING] Javadoc Warnings [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/SolutionModel.java:5: warning: sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] import sun.reflect.generics.reflectiveObjects.NotImplementedException; [WARNING] ^ [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/multi/MultiClassModel.java:18: warning: sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] import sun.reflect.generics.reflectiveObjects.NotImplementedException; [WARNING] ^ [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/legacyexec/svm_train.java:38: warning: sun.reflect.generics.reflectiveObjects.NotImplementedException is Sun proprietary API and may be removed in a future release [WARNING] import sun.reflect.generics.reflectiveObjects.NotImplementedException; [WARNING] ^ [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/oneclass/OneClassModel.java:66: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/multi/MultiClassificationSVM.java:199: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/util/MathSupport.java:195: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/binary/BinaryClassificationSVM.java:178: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/binary/BinaryClassificationSVM.java:201: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/binary/BooleanClassificationProblemImpl.java:109: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/scaler/NoopScalingModel.java:21: warning - @return tag has no arguments. [WARNING] /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/src/main/java/edu/berkeley/compbio/jlibsvm/scaler/NoopScalingModelLearner.java:20: warning - @return tag has no arguments. [INFO] Fixed Javadoc frame injection vulnerability (CVE-2013-1571) in 1 files. [INFO] Building jar: /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-javadoc.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2:10.157s [INFO] Finished at: Sat Jul 12 20:49:22 EDT 2014 [INFO] Final Memory: 18M/45M [INFO] ------------------------------------------------------------------------ [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/pom.xml to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT.pom [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT.jar to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT.jar [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-sources.jar to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT-sources.jar [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-tests.jar to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT-tests.jar [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-distribution.tar.gz to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT-distribution.tar.gz [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-distribution.tar.gz to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT.tar.gz [JENKINS] Archiving /usr/share/apache-tomcat-7.0.22/.jenkins/jobs/jlibsvm/workspace/target/jlibsvm-0.92-SNAPSHOT-javadoc.jar to edu.berkeley.compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-SNAPSHOT-javadoc.jar channel stopped Maven RedeployPublisher use remote maven settings from : 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artifact jlibsvm-0.92-SNAPSHOT-tests.jar Uploading: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-tests.jar Uploaded: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-tests.jar (56322 KB at 6543.7 KB/sec) Uploading: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml Uploaded: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml (2 KB at 11.8 KB/sec) Deploying the main artifact jlibsvm-0.92-SNAPSHOT-distribution.tar.gz Uploading: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-distribution.tar.gz Uploaded: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-distribution.tar.gz (3141 KB at 6145.1 KB/sec) Uploading: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml Uploaded: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml (2 KB at 14.9 KB/sec) Deploying the main artifact jlibsvm-0.92-SNAPSHOT.tar.gz Uploading: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10.tar.gz Uploaded: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10.tar.gz (3141 KB at 5376.9 KB/sec) Uploading: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml Uploaded: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml (2 KB at 12.2 KB/sec) Deploying the main artifact jlibsvm-0.92-SNAPSHOT-javadoc.jar Uploading: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-javadoc.jar Uploaded: dav:http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/jlibsvm-0.92-20140713.004924-10-javadoc.jar (591 KB at 2093.5 KB/sec) Uploading: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml Uploaded: http://dev.davidsoergel.com/nexus/content/repositories/snapshots/edu/berkeley/compbio/jlibsvm/0.92-SNAPSHOT/maven-metadata.xml (2 KB at 17.7 KB/sec) [INFO] Deployment done in 12 sec Warning: you have no plugins providing access control for builds, so falling back to legacy behavior of permitting any downstream builds to be triggered Triggering a new build of jlibsvm-docs-deploy Triggering a new build of msensr Finished: SUCCESS